Deep sequencing reads for mature sequence MIMAT0013672

Stem-loop ID

bmo-mir-2781

Mature ID

bmo-miR-2781

Reads

            bmo-miR-2781                                                        Count     RPM (mean number of reads per million)
..........UACCAGAUGUUAGAUUGAAGGAGGUCA..........................................  18        4.1
..........UACCAGAUGUUAGAUUGAAGGAG..............................................  3         1.32
..........UACCAGAUGUUAGAUUGAAGGAGGUCAG.........................................  3         0.688
..........UACCAGAUGUUAGAUUGAAGGAGGUC...........................................  2         0.455
..........UACCAGAUGUUAGAUUGAAGGA...............................................  1         0.227
..........UACCAGAUGUUAGAUUGAAGGAGG.............................................  1         0.227
..........UACCAGAUGUUAGAUUGAAGGAGGU............................................  1         0.227
AUGGCUGAUUUACCAGAUGUUAGAUUGAAGGAGGUCAGUCGACCUUUCACUUACACCGGGUUAGAUUAUUUCGGUCCAA
.(((((((((((((.(.(((.((..(((..((((((....))))))))))).))).).)).)))).....)))).))). (-19.10)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000268	36	whole body	GEO : GSM449725	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000269	2	anterior silk glands	GEO : GSM449726	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000270	1	posterior silk glands	GEO : GSM449727	5th-instar day-3 larvae	[ Liu S et al.]

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).