miRNA Search Results

Deep sequencing reads for mature sequence MIMAT0011693
Stem-loop ID	ppc-mir-2238c
Mature ID	ppc-miR-2238c
Reads	ppc-miR-2238c Count RPM (mean number of reads per million) ..............................................................AAUGACAGAACAAGUGCGCG........................ 1 109 ..............................................................AAUGACAGAACAAGUGCGCGAG...................... 1 109 UUAUGAUACCUAGUCGAUCCUCUUUCCCGUUCACUCUUCUCGUCAGUCGAUGAUGAAUUUCGAAUGACAGAACAAGUGCGCGAGAAGGAAGACUAGCUUCCGUGAU (((((..(.((((((.....((((((.(((.((((.((((.((((.((((.........)))).))))))))..)))).))).)))))).)))))).)..))))). (-34.80)

                                                               ppc-miR-2238c                                Count     RPM (mean number of reads per million)
..............................................................AAUGACAGAACAAGUGCGCG........................  1         109
..............................................................AAUGACAGAACAAGUGCGCGAG......................  1         109
UUAUGAUACCUAGUCGAUCCUCUUUCCCGUUCACUCUUCUCGUCAGUCGAUGAUGAAUUUCGAAUGACAGAACAAGUGCGCGAGAAGGAAGACUAGCUUCCGUGAU
(((((..(.((((((.....((((((.(((.((((.((((.((((.((((.........)))).))))))))..)))).))).)))))).)))))).)..))))). (-34.80)

miRBase

Deep sequencing reads for mature sequence MIMAT0011693

Filter reads

References

References
1	PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).