Deep sequencing reads for mature sequence MIMAT0009657

Stem-loop ID spu-mir-31
Mature ID spu-miR-31
Reads
                     spu-miR-31                                                                     Count     RPM (mean number of reads per million)
..................AGGCAAGAUGUUGGCAUAGCU............................................................  52        5.04e+03
..................AGGCAAGAUGUUGGCAUAGCUG...........................................................  25        2.42e+03
..................AGGCAAGAUGUUGGCAUAGC.............................................................  11        1.07e+03
..................AGGCAAGAUGUUGGCAUAGCUGU..........................................................  7         678
...................GGCAAGAUGUUGGCAUAGCUG...........................................................  2         194
....................GCAAGAUGUUGGCAUAGCUGU..........................................................  1         96.9
....................GCAAGAUGUUGGCAUAGC.............................................................  1         96.9
UACAAACCAGUGGAGAAAAGGCAAGAUGUUGGCAUAGCUGUGAUUUAAAUAUUAACCCAGCUGUGUCUUCAUACUGCCAUUUAUUCACUUGGUUGUUCG
....((((((((((.(((.((((..(((..((((((((((((((......))))...))))))))))..)))..)))).))).))))).)))))..... (-36.50)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000134 164whole body [ Wheeler BM et al.]
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).