miRNA Search Results

Deep sequencing reads for mature sequence MIMAT0009471
Stem-loop ID	bfl-mir-29a
Mature ID	bfl-miR-29a-3p
Reads	bfl-miR-29a-5p bfl-miR-29a-3p Count RPM (mean number of reads per million) .CCUGGGAAUUCUGUGCACGGAA........................................................................ 2 40.2 ..CUGGGAAUUCUGUGCACGGAA........................................................................ 1 20.1 ....GGGAAUUCUGUGCACGGAA........................................................................ 3 60.3 ......................AGCUGAUUUCAGUUGGUGCUAGA.................................................. 21 422 ......................AGCUGAUUUCAGUUGGUGCUAG................................................... 2 40.2 ......................AGCUGAUUUCAGUUGGUGCUAGAU................................................. 1 20.1 .......................GCUGAUUUCAGUUGGUGCUAGA.................................................. 3092 6.21e+04 .......................GCUGAUUUCAGUUGGUGCUAG................................................... 358 7.19e+03 .......................GCUGAUUUCAGUUGGUGCUAGAU................................................. 122 2.45e+03 .......................GCUGAUUUCAGUUGGUGCU..................................................... 16 321 .......................GCUGAUUUCAGUUGGUGCUA.................................................... 5 100 .......................GCUGAUUUCAGUUGGUGCUAGAUA................................................ 2 40.2 ........................CUGAUUUCAGUUGGUGCUAGA.................................................. 5 100 ............................................................UAGCACCAUAUGAAAUCAGUUAU............ 371 7.45e+03 ............................................................UAGCACCAUAUGAAAUCAGUUA............. 15 301 ............................................................UAGCACCAUAUGAAAUCAGUU.............. 1 20.1 ............................................................UAGCACCAUAUGAAAUCAGU............... 1 20.1 .............................................................AGCACCAUAUGAAAUCAGUUAU............ 2 40.2 ..............................................................GCACCAUAUGAAAUCAGUUAU............ 51 1.02e+03 ..............................................................GCACCAUAUGAAAUCAGUUA............. 3 60.3 ................................................................ACCAUAUGAAAUCAGUUAU............ 1 20.1 .................................................................CCAUAUGAAAUCAGUUAU............ 1 20.1 UCCUGGGAAUUCUGUGCACGGAAGCUGAUUUCAGUUGGUGCUAGAUAGAAGUCGGCGUUCUAGCACCAUAUGAAAUCAGUUAUCGGUGCAUAGGC ..........(((((((((.(((((((((((((..((((((((((.............))))))))))..))))))))))).)).))))))))). (-47.12)

                       bfl-miR-29a-5p                       bfl-miR-29a-3p                       Count     RPM (mean number of reads per million)
.CCUGGGAAUUCUGUGCACGGAA........................................................................  2         40.2
..CUGGGAAUUCUGUGCACGGAA........................................................................  1         20.1
....GGGAAUUCUGUGCACGGAA........................................................................  3         60.3
......................AGCUGAUUUCAGUUGGUGCUAGA..................................................  21        422
......................AGCUGAUUUCAGUUGGUGCUAG...................................................  2         40.2
......................AGCUGAUUUCAGUUGGUGCUAGAU.................................................  1         20.1
.......................GCUGAUUUCAGUUGGUGCUAGA..................................................  3092      6.21e+04
.......................GCUGAUUUCAGUUGGUGCUAG...................................................  358       7.19e+03
.......................GCUGAUUUCAGUUGGUGCUAGAU.................................................  122       2.45e+03
.......................GCUGAUUUCAGUUGGUGCU.....................................................  16        321
.......................GCUGAUUUCAGUUGGUGCUA....................................................  5         100
.......................GCUGAUUUCAGUUGGUGCUAGAUA................................................  2         40.2
........................CUGAUUUCAGUUGGUGCUAGA..................................................  5         100
............................................................UAGCACCAUAUGAAAUCAGUUAU............  371       7.45e+03
............................................................UAGCACCAUAUGAAAUCAGUUA.............  15        301
............................................................UAGCACCAUAUGAAAUCAGUU..............  1         20.1
............................................................UAGCACCAUAUGAAAUCAGU...............  1         20.1
.............................................................AGCACCAUAUGAAAUCAGUUAU............  2         40.2
..............................................................GCACCAUAUGAAAUCAGUUAU............  51        1.02e+03
..............................................................GCACCAUAUGAAAUCAGUUA.............  3         60.3
................................................................ACCAUAUGAAAUCAGUUAU............  1         20.1
.................................................................CCAUAUGAAAUCAGUUAU............  1         20.1
UCCUGGGAAUUCUGUGCACGGAAGCUGAUUUCAGUUGGUGCUAGAUAGAAGUCGGCGUUCUAGCACCAUAUGAAAUCAGUUAUCGGUGCAUAGGC
..........(((((((((.(((((((((((((..((((((((((.............))))))))))..))))))))))).)).))))))))). (-47.12)

miRBase

Deep sequencing reads for mature sequence MIMAT0009471

Filter reads

References

References
1	PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).