Deep sequencing reads for mature sequence MIMAT0004758

Stem-loop ID mmu-mir-463
Mature ID mmu-miR-463-3p
Reads 
   mmu-miR-463-5p                       mmu-miR-463-3p                        Count     RPM (mean number of reads per million)
...UACCUAAUUUGUUGUCCAUCAUG.................................................  16        5.82
...UACCUAAUUUGUUGUCCAUC....................................................  12        4.59
...UACCUAAUUUGUUGUCCAU.....................................................  10        1.66
...UACCUAAUUUGUUGUCCAUCAU..................................................  7         2.1
...UACCUAAUUUGUUGUCCAUCA...................................................  5         1.28
...UACCUAAUUUGUUGUCCAUCAUGU................................................  4         0.626
...UACCUAAUUUGUUGUCC.......................................................  1         0.771
...UACCUAAUUUGUUGUCCA......................................................  1         0.771
....ACCUAAUUUGUUGUCCAUCAUG.................................................  1         0.654
......CUAAUUUGUUGUCCAUCAUGU................................................  1         0.654
......CUAAUUUGUUGUCCAUCAUG.................................................  1         0.771
.......UAAUUUGUUGUCCAUCAUG.................................................  1         0.654
........AAUUUGUUGUCCAUCAUG.................................................  1         0.654
.........AUUUGUUGUCCAUCAUG.................................................  7         9.31
.........AUUUGUUGUCCAUCAUGU................................................  2         1.31
..........UUUGUUGUCCAUCAUGU................................................  3         2.08
........................................UGAUAGACACCAUAUAAGGUAGA............  272       338
........................................UGAUAGACACCAUAUAAGGUAG.............  203       207
........................................UGAUAGACACCAUAUAAGGUA..............  25        32.9
........................................UGAUAGACACCAUAUAAGGU...............  19        19.3
........................................UGAUAGACACCAUAUAAGG................  7         10.3
.........................................GAUAGACACCAUAUAAGGUAGA............  5         15.5
.........................................GAUAGACACCAUAUAAGGUAG.............  5         6.45
.........................................GAUAGACACCAUAUAAGGU...............  1         0.654
..........................................AUAGACACCAUAUAAGGUAGA............  91        98.4
..........................................AUAGACACCAUAUAAGGUAG.............  13        15
...........................................UAGACACCAUAUAAGGUAG.............  5         3.51
...........................................UAGACACCAUAUAAGGUAGA............  5         8.24
............................................AGACACCAUAUAAGGUAGA............  3         4.91
............................................AGACACCAUAUAAGGUAG.............  2         1.54
..............................................ACACCAUAUAAGGUAGA............  4         5.8
CUUUACCUAAUUUGUUGUCCAUCAUGUAAAACAUAAAUGAUGAUAGACACCAUAUAAGGUAGAGGAAGGUUCACU
((((((((.((.((.((((((((((...........))))))...)))).)).)).))))))))........... (-20.20)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000032 65testes GEO : GSM510436 [ Chiang HR et al.]
ER0000000033 315testes GEO : GSM510437 [ Chiang HR et al.]
ER0000000034 345testes GEO : GSM510438 [ Chiang HR et al.]
ER0000000035 43testes GEO : GSM510439 [ Chiang HR et al.]
ER0000000045 1whole body GEO : GSM510449 Newborn. [ Chiang HR et al.]
ER0000000048 2whole body GEO : GSM510452 Newborn. [ Chiang HR et al.]
ER0000000049 3whole body GEO : GSM510453 Newborn. [ Chiang HR et al.]
ER0000000050 5whole body GEO : GSM510454 Newborn. [ Chiang HR et al.]
ER0000000051 2whole body GEO : GSM510455 Newborn. [ Chiang HR et al.]
ER0000000052 10whole body GEO : GSM510456 Newborn. [ Chiang HR et al.]
ER0000000058 1embryo GEO : GSM510462 day 9.5 embryo [ Chiang HR et al.]
ER0000000247 2 GEO : GSM539866 strain: C57BL/6-129
ER0000000254 1pancreas GEO : GSM539873 strain: C57BL/6J, gender: male
ER0000000258 32testes GEO : GSM539877 strain: C57BL/6J, gender: male
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).