Deep sequencing reads for mature sequence MIMAT0003464

Stem-loop ID mmu-mir-686
Mature ID mmu-miR-686
Reads 
                     mmu-miR-686                                                                               Count     RPM (mean number of reads per million)
....................UGCUUCCCAGACGGUGAAGAAAGU.................................................................  1         0.0694
.......................UUCCCAGACGGUGAAGAAAGU.................................................................  1         0.104
........................UCCCAGACGGUGAAGAAAGU.................................................................  1         0.0608
........................UCCCAGACGGUGAAGAAAGUAA...............................................................  1         0.0264
........................UCCCAGACGGUGAAGAAAG..................................................................  1         0.361
.......................................................................CACCAUGGCUGGGGGUGCAGCGGA..............  1         0.0411
...........................................................................AUGGCUGGGGGUGCAGCGGAU.............  1         0.0382
..................................................................................GGGGUGCAGCGGAUUGCAGC.......  2         0.101
..................................................................................GGGGUGCAGCGGAUUGCAG........  1         0.039
GCCACAGCAGGUGCUUAUAUUGCUUCCCAGACGGUGAAGAAAGUAAUAGAGAUCAACCCGUACCUUCUGGGCACCAUGGCUGGGGGUGCAGCGGAUUGCAGCUUCUGGG
.((.(((.((.(((.....(((((((((((..((((.((((.(((...(.(......)).))).))))...))))....))))))).))))......))).)).))))) (-35.50)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000038 1brain GEO : GSM510442 [ Chiang HR et al.]
ER0000000043 1whole body GEO : GSM510447 Newborn. [ Chiang HR et al.]
ER0000000048 1whole body GEO : GSM510452 Newborn. [ Chiang HR et al.]
ER0000000052 1whole body GEO : GSM510456 Newborn. [ Chiang HR et al.]
ER0000000062 1embryo GEO : GSM510466 day 7.5 embryo [ Chiang HR et al.]
ER0000000222 1spleen GEO : GSM539841 strain: C57BL/6J, gender: male, isolation: CD43 negative magnetic beads selection
ER0000000223 1spleen GEO : GSM539842 strain: C57BL/6J, gender: male, isolation: CD43 negative magnetic beads selection
ER0000000224 1spleen GEO : GSM539843 strain: C57BL/6J, gender: male, isolation: CD43 negative magnetic beads selection
ER0000000240 1spleen GEO : GSM539859 strain: C57BL/6J, gender: male
ER0000000247 1 GEO : GSM539866 strain: C57BL/6-129
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).