Deep sequencing reads for stem-loop sequence MI0017248

Stem-loop ID

osa-MIR1862f

Reads

                                                           osa-miR1862f          Count     RPM (mean number of reads per million)
.........................................................UAUGAGGUUGGUUUAUUUUG..  20        9.42
..........................................................AUGAGGUUGGUUUAUUUUGGA  42        20
..........................................................AUGAGGUUGGUUUAUUUUGG.  40        19
..........................................................AUGAGGUUGGUUUAUUUUG..  38        18.1
..........................................................AUGAGGUUGGUUUAUUUU...  36        17.1
...........................................................UGAGGUUGGUUUAUUUUGG.  38        18.1
...........................................................UGAGGUUGGUUUAUUUUG..  36        17.1
CUUAAAAUAAACCAGCCUCGUAAAGAAUGGAGUACAUUCUAGCACUACUAGCAUGUAUAUGAGGUUGGUUUAUUUUGGA
.(((((((((((((((((((((.((((((.....)))))).((.......)).....))))))))))))))))))))). (-33.70)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000201	1507	whole body	GEO : GSM571077	strain: indica 93-11, age: 12-day-old, stress: control	[ Li T et al.]
ER0000000202	910	whole body	GEO : GSM571078	strain: indica 93-11, stress: H2O2	[ Li T et al.]

References

1. PMID:21113019 "Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)" Li T, Li H, Zhang YX, Liu JY Nucleic Acids Res. 39:2821-2833(2011).