Deep sequencing reads for stem-loop sequence MI0016186

Stem-loop ID

ame-mir-3779

Reads

       ame-miR-3779                                                                                      Count     RPM (mean number of reads per million)
....GGCCGGGCCUGCCGCUCGA................................................................................  2         1.81
.....GCCGGGCCUGCCGCUCGACA..............................................................................  1         0.907
.....GCCGGGCCUGCCGCUCGACAC.............................................................................  1         0.907
......CCGGGCCUGCCGCUCGACACG............................................................................  1         0.907
........GGGCCUGCCGCUCGACACG............................................................................  1         0.907
..............................................CUUGUUGCGCUUCAUGGUUC.....................................  1         0.907
.......................................................CUUCAUGGUUCAAAAAGGU.............................  1         0.907
CACCGGCCGGGCCUGCCGCUCGACACGCACCGUCCGCUUCGUUGAACUUGUUGCGCUUCAUGGUUCAAAAAGGUUGCUCGAUCAACCGGCAUGUCUGGUCGGA
..((((((((((.(((((.((((...(((......((((..(((((((((........)).)))))))..))))))))))).....))))).)))))))))). (-40.60)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000271	12	whole body	SRA : SRA012371		[ Chen X et al.]

References

1. PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).