Deep sequencing reads for stem-loop sequence MI0014459

Stem-loop ID

bmo-mir-3396

Reads

               bmo-miR-3396                                                                                                                      Count     RPM (mean number of reads per million)
...................................................GCUUCAAAGUUGUUGGGCAU.........................................................................  1         0.35
......................................................UCAAAGUUGUUGGGCAUCUU......................................................................  1         0.35
UUCGGAUCCUUCUCCAGUUUCUAUUUCACGGACGUCAGGCGAUUUAAUGCGGCUUCAAAGUUGUUGGGCAUCUUCGGGUUCUCCUCUCCUCUCCCCGCAGUGCGGUCUCGUAGCGGCCGUCGGGUCGUUGCUGGGUGGAAUCCC
...((((((...((((((..(.(((..((((.((..(.(.((((...(((((......((..(..(((.(((....))).)))..)..))....)))))....)))).).)..)).))))..))).)..)))))).)).)))). (-44.70)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000269	9	anterior silk glands	GEO : GSM449726	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000270	6	posterior silk glands	GEO : GSM449727	5th-instar day-3 larvae	[ Liu S et al.]

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).