Deep sequencing reads for stem-loop sequence MI0014397

Stem-loop ID bmo-mir-3339
Reads 
         bmo-miR-3339                                                                   Count     RPM (mean number of reads per million)
.....UUUAGACUUUUUAGAUGUUGGUCAAGC.......................................................  1         0.341
................................................AUCAUUCCGACAUGUUGACCG..................  1         0.35
UGGUUUUUAGACUUUUUAGAUGUUGGUCAAGCUCGUGAUCUGUGUCCGAUCAUUCCGACAUGUUGACCGAUUAAUUAGAAAUUGUCC
.........((((((((((..(((((((((..((((((((.......)))))...)))....)))))))))...)))))))..))). (-20.10)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000268 1whole body GEO : GSM449725 5th-instar day-3 larvae [ Liu S et al.]
ER0000000269 1anterior silk glands GEO : GSM449726 5th-instar day-3 larvae [ Liu S et al.]
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).