Deep sequencing reads for stem-loop sequence MI0012347

Stem-loop ID

bmo-mir-2774a-2

Reads

                                           bmo-miR-2774a                   Count     RPM (mean number of reads per million)
ACAACAACAUUCGGACCGUCGGU..................................................  1         0.233
...ACAACAUUCGGACCGUCGGUC.................................................  1         0.233
....CAACAUUCGGACCGUCGGUC.................................................  2         1.09
............GGACCGUCGGUCUACCGAGCAA.......................................  14        6.41
............GGACCGUCGGUCUACCGAGCA........................................  11        3.19
............GGACCGUCGGUCUACCGAGC.........................................  10        6.1
.............GACCGUCGGUCUACCGAGCAAU......................................  3         0.7
........................UACCGAGCAAUAUCACCCGC.............................  1         0.233
...............................CAAUAUCACCCGCUCGGUGG......................  1         0.233
...........................................CUCGGUGGAAGAUCGUCCCUUU........  49        19.5
ACAACAACAUUCGGACCGUCGGUCUACCGAGCAAUAUCACCCGCUCGGUGGAAGAUCGUCCCUUUGUCAUUAU
......(((...((((.(((..((((((((((..........)))))))))).))).))))...)))...... (-27.90)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000268	58	whole body	GEO : GSM449725	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000269	97	anterior silk glands	GEO : GSM449726	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000270	41	posterior silk glands	GEO : GSM449727	5th-instar day-3 larvae	[ Liu S et al.]

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).