miRNA Search Results

Deep sequencing reads for stem-loop sequence MI0012122
Stem-loop ID	cte-mir-2686c
Reads	cte-miR-2686c Count RPM (mean number of reads per million) .....................................................AAAGAUGUUCUUAAUGUAGGUUUC........ 3 86.9 .....................................................AAAGAUGUUCUUAAUGUAGGUUU......... 3 86.9 .....................................................AAAGAUGUUCUUAAUGUAGGU........... 1 29 ......................................................AAGAUGUUCUUAAUGUAGGUUU......... 143 4.14e+03 ......................................................AAGAUGUUCUUAAUGUAGGUUUC........ 122 3.54e+03 ......................................................AAGAUGUUCUUAAUGUAGGUU.......... 21 609 ......................................................AAGAUGUUCUUAAUGUAGGUUUCU....... 10 290 ......................................................AAGAUGUUCUUAAUGUAGGU........... 6 174 .......................................................AGAUGUUCUUAAUGUAGGUUUC........ 6 174 .......................................................AGAUGUUCUUAAUGUAGGUUU......... 2 58 .......................................................AGAUGUUCUUAAUGUAGGU........... 1 29 ........................................................GAUGUUCUUAAUGUAGGUUU......... 1 29 UAUCACAAGAACCUAUAUUUGGGACAGCUCUCAUGGAACUCUUGAUAUCAUAGAAAGAUGUUCUUAAUGUAGGUUUCUUGUGCUG ...((((((((((((((((.((((((.((.((((((..(....)...)))).)).)).)))))).)))))))).))))))))... (-28.30)

                                                      cte-miR-2686c                   Count     RPM (mean number of reads per million)
.....................................................AAAGAUGUUCUUAAUGUAGGUUUC........  3         86.9
.....................................................AAAGAUGUUCUUAAUGUAGGUUU.........  3         86.9
.....................................................AAAGAUGUUCUUAAUGUAGGU...........  1         29
......................................................AAGAUGUUCUUAAUGUAGGUUU.........  143       4.14e+03
......................................................AAGAUGUUCUUAAUGUAGGUUUC........  122       3.54e+03
......................................................AAGAUGUUCUUAAUGUAGGUU..........  21        609
......................................................AAGAUGUUCUUAAUGUAGGUUUCU.......  10        290
......................................................AAGAUGUUCUUAAUGUAGGU...........  6         174
.......................................................AGAUGUUCUUAAUGUAGGUUUC........  6         174
.......................................................AGAUGUUCUUAAUGUAGGUUU.........  2         58
.......................................................AGAUGUUCUUAAUGUAGGU...........  1         29
........................................................GAUGUUCUUAAUGUAGGUUU.........  1         29
UAUCACAAGAACCUAUAUUUGGGACAGCUCUCAUGGAACUCUUGAUAUCAUAGAAAGAUGUUCUUAAUGUAGGUUUCUUGUGCUG
...((((((((((((((((.((((((.((.((((((..(....)...)))).)).)).)))))).)))))))).))))))))... (-28.30)

miRBase

Deep sequencing reads for stem-loop sequence MI0012122

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References

References
1	PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).