miRNA Search Results

Deep sequencing reads for stem-loop sequence MI0011177
Stem-loop ID	ppc-mir-2235-4
Reads	ppc-miR-2235 Count RPM (mean number of reads per million) ......................................................UCACCGGGAGCAUUGUAUGAU............... 1 109 ......................................................UCACCGGGAGCAUUGUAUGAUC.............. 1 109 ......................................................UCACCGGGAGCAUUGUAUG................. 1 109 GGGCCGCUCUUGCCCGCUCAUUCAAUAUUGCCGGUUUGAACGAAAUUGAUCAGUUCACCGGGAGCAUUGUAUGAUCGGGCUUCGGACCCU ((((((.....(((((.((((.((((.((.(((((..((((((......)).))))))))).)).)))).)))).)))))..))).))). (-39.20)

                                                        ppc-miR-2235                        Count     RPM (mean number of reads per million)
......................................................UCACCGGGAGCAUUGUAUGAU...............  1         109
......................................................UCACCGGGAGCAUUGUAUGAUC..............  1         109
......................................................UCACCGGGAGCAUUGUAUG.................  1         109
GGGCCGCUCUUGCCCGCUCAUUCAAUAUUGCCGGUUUGAACGAAAUUGAUCAGUUCACCGGGAGCAUUGUAUGAUCGGGCUUCGGACCCU
((((((.....(((((.((((.((((.((.(((((..((((((......)).))))))))).)).)))).)))).)))))..))).))). (-39.20)

miRBase

Deep sequencing reads for stem-loop sequence MI0011177

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References

References
1	PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).