Deep sequencing reads for stem-loop sequence MI0011177

Stem-loop ID ppc-mir-2235-4
Reads
                                                        ppc-miR-2235                        Count     RPM (mean number of reads per million)
......................................................UCACCGGGAGCAUUGUAUGAU...............  1         109
......................................................UCACCGGGAGCAUUGUAUGAUC..............  1         109
......................................................UCACCGGGAGCAUUGUAUG.................  1         109
GGGCCGCUCUUGCCCGCUCAUUCAAUAUUGCCGGUUUGAACGAAAUUGAUCAGUUCACCGGGAGCAUUGUAUGAUCGGGCUUCGGACCCU
((((((.....(((((.((((.((((.((.(((((..((((((......)).))))))))).)).)))).)))).)))))..))).))). (-39.20)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000027 6whole body GEO : GSM378787 [ de Wit E et al.]
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References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).