Deep sequencing reads for stem-loop sequence MI0011142

Stem-loop ID

ppc-mir-63c-4

Reads

                                                                     ppc-miR-63c                                     Count     RPM (mean number of reads per million)
..................................................................UAUGACACUCAAUGCGAGAUGGG...........................  2         218
..................................................................UAUGACACUCAAUGCGAGAUG.............................  1         109
..................................................................UAUGACACUCAAUGCGAGAUGG............................  1         109
GGUACCCGAACCAUAAUCCAUGUGGGGUUCCAUUCGCAUGAGUUUCAUGGACUCGAUUCAUAGAUCUAUGACACUCAAUGCGAGAUGGGACCUCGGUGGACCAAUGGUUCGGUACC
((((((.(((((((..(((((.(((((((((((((((((((((.(((((((.((........))))))))).)))).)))))).))))))))))))))))...))))))))))))) (-64.10)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000027	118	whole body	GEO : GSM378787		[ de Wit E et al.]

References

1. PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).