Deep sequencing reads for stem-loop sequence MI0010626

Stem-loop ID

bmo-mir-993a

Reads

             bmo-miR-993a-5p                         bmo-miR-993a-3p                      Count     RPM (mean number of reads per million)
..............CUACCCUGUAGAUCCGGGCUUU....................................................  3         1.02
..............CUACCCUGUAGAUCCGGGCUU.....................................................  3         1.02
..............CUACCCUGUAGAUCCGGGCUUUUG..................................................  1         0.341
...............UACCCUGUAGAUCCGGGCUUUUG..................................................  6         2.05
...............UACCCUGUAGAUCCGGGCUUUU...................................................  5         1.7
...............UACCCUGUAGAUCCGGGCUU.....................................................  1         0.341
................ACCCUGUAGAUCCGGGCUUUUG..................................................  5         1.72
................ACCCUGUAGAUCCGGGCUUUU...................................................  3         1.02
................ACCCUGUAGAUCCGGGCUUUUGU.................................................  1         0.341
................ACCCUGUAGAUCCGGGCUUU....................................................  1         0.341
......................................................GAAGCUCGUCUCUACAGGUAUCU...........  4         1.36
GGCACAUUCGUGAUCUACCCUGUAGAUCCGGGCUUUUGUAGAUUAAUUACAUCAGAAGCUCGUCUCUACAGGUAUCUCACGGCUGGAA
....((..(((((..((((.((((((..((((((((((..............))))))))))..))))))))))..)))))..))... (-36.34)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000268	34	whole body	GEO : GSM449725	5th-instar day-3 larvae	[ Liu S et al.]
ER0000000269	3	anterior silk glands	GEO : GSM449726	5th-instar day-3 larvae	[ Liu S et al.]

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).