Deep sequencing reads for stem-loop sequence MI0008288

Stem-loop ID osa-MIR1882a
Reads 
                          osa-miR1882a                                                                                                                           Count     RPM (mean number of reads per million)
.......................AGAUUGCUUUCAAGGUCAUUUCUU................................................................................................................  4         63.2
.......................AGAUUGCUUUCAAGGUCAUUUCU.................................................................................................................  1         20
........................GAUUGCUUUCAAGGUCAUUUCU.................................................................................................................  2         40
UCUGUUAUCGGUACCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAUGGAAGCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGUUGUAUCUAAAUAGGGGUUCCAUAACGAAAUGAUCUUGGAUGCAAUCUAGGAGUUUGCUGAUGAUAACG
..(((((((((((......(((((((((((.((((((((((((((.((((((((.(((.............(((((.(((....))).)))))..........))).)))))))).)))))))))))))).)))))))))))...)))))))))))... (-67.80)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000008 3whole body GEO : GSM407071 [ Johnson C et al.]
ER0000000009 4whole body GEO : GSM407072 [ Johnson C et al.]
ER0000000201 24whole body GEO : GSM571077 strain: indica 93-11, age: 12-day-old, stress: control [ Li T et al.]
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References

1
PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice" Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH Genome Res. 19:1429-1440(2009).
2
PMID:21113019 "Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)" Li T, Li H, Zhang YX, Liu JY Nucleic Acids Res. 39:2821-2833(2011).