Deep sequencing reads for stem-loop sequence MI0003605

Stem-loop ID hsa-mir-593
Reads 
                hsa-miR-593-5p                                              hsa-miR-593-3p            Count     RPM (mean number of reads per million)
CCCCCAGAAUCUGUCAGGCACCAGCCAGGCAUUGCUCAGCCCGUUUCCCUCUGGGGGAGCAAGGAGUGGUGCUGGGUUUGUCUCUGCUGGGGUUUCUCCU
.((((((.......((((.((.((((.(((((..(((.....(((((((....)))))))...)))..))))).)))).)).))))))))))........ (-44.71)

Filter reads

by experiment
Accession Read count Tissue Link Comment Reference
ER0000000140 1squamous cell GEO : GSM532876 [ Witten D et al.]
ER0000000178 1squamous cell GEO : GSM532914 [ Witten D et al.]
ER0000000180 1squamous cell GEO : GSM532916 [ Witten D et al.]
ER0000000188 1squamous cell GEO : GSM532924 [ Witten D et al.]
by # mismatches     Display untemplated ends
by read count min max

References

1
PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).