Deep sequencing reads for stem-loop sequence MI0003573

Stem-loop ID

hsa-mir-567

Reads

                  hsa-miR-567                                                                      Count     RPM (mean number of reads per million)
......................................................................AAAACUAAAAAAAAAAA...........  1         18.6
.......................................................................AAACUAAAAAAAAAAAAA.........  1         5.45
.......................................................................AAACUAAAAAAAAAAAA..........  1         14
GGAUUCUUAUAGGACAGUAUGUUCUUCCAGGACAGAACAUUCUUUGCUAUUUUGUACUGGAAGAACAUGCAAAACUAAAAAAAAAAAAAGUUAUUGCU
.........(((....((((((((((((((.((((((((.....))...)))))).))))))))))))))....)))..................... (-27.80)

Filter reads

by experiment

Accession	Read count	Tissue	Link	Comment	Reference
ER0000000137	6		GEO : GSM532873	normal cervix	[ Witten D et al.]
ER0000000139	5		GEO : GSM532875	normal cervix	[ Witten D et al.]
ER0000000143	8		GEO : GSM532879	normal cervix	[ Witten D et al.]
ER0000000149	1		GEO : GSM532885	normal cervix	[ Witten D et al.]
ER0000000153	1		GEO : GSM532889	normal cervix	[ Witten D et al.]
ER0000000155	15		GEO : GSM532891	normal cervix	[ Witten D et al.]
ER0000000163	7		GEO : GSM532899	normal cervix	[ Witten D et al.]
ER0000000167	13		GEO : GSM532903	normal cervix	[ Witten D et al.]
ER0000000173	25		GEO : GSM532909	normal cervix	[ Witten D et al.]
ER0000000177	14		GEO : GSM532913	normal cervix	[ Witten D et al.]
ER0000000179	13		GEO : GSM532915	normal cervix	[ Witten D et al.]
ER0000000185	7		GEO : GSM532921	normal cervix	[ Witten D et al.]
ER0000000187	8		GEO : GSM532923	normal cervix	[ Witten D et al.]

References

1. PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).